Physics Student Successes at Conferences

Congratulations to our students for their successes at these various conferences.

UofTAI (University of Toronto Artificial Intelligence)

Our students participated in the Project X competition. This year's theme was Health and our students competed in the Genetics category and won first prize! They also gave a presentation at this year's UofTAI conference held in February. Congratulations goes to Awini Altabaa, Ciaran Byles-Ho, David Huang, Hani Khatib, and Fabian Sosa.

IEEE (Institute of Electrical and Electronics Engineers)

The research paper that won the Project X competition, went on to win the "Best Student Paper" award at the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB) held in Ottawa from Aug 15-17.

Paper title:

geneDRAGNN: Gene Disease Prioritization using Graph Neural Networks
Awini Altabaa (��ֱ��), David Huang (��ֱ��), Ciaran Byles-Ho (��ֱ��), Hani Khatib (��ֱ��), Fabian Sosa (��ֱ��) and Ting Hu (��ֱ��).

Abstract:

Many human diseases exhibit a complex genetic etiology impacted by various genes and proteins in a large network of interactions. The process of evaluating gene-disease associations through in-vivo experiments is both time-consuming and expensive. Thus, network-based computational methods capable of modeling the complex interplay between molecular components can lead to more targeted evaluation. In this paper, we propose and evaluate geneDRAGNN: a general data processing and machine learning methodology for exploiting information about gene- gene interaction networks for predicting gene-disease association. We demonstrate that information derived from the gene-gene interaction network can significantly improve the performance of gene- disease association prediction models. We apply this methodology to lung adenocarcinoma, a histological subtype of lung cancer. We identify new potential genes-disease associations and provide supportive evidence for the association through gene-set enrichment and literature based analysis.

2022 Canadian Astroparticle Summer Student Talk (CASST) Competition

Congratulations to the ��ֱ�� students who participated! Matt Marzano placed 4th, Ciaran Boyles-Ho placed 6th and Irena Babayan and Henry White received Honourable Mentions.

Below are some pictures from UofTAI and IEEE Computational Intelligence in Bioinformatics and Computational Biology conferences.

Article Category

Student News